Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Gm18101-201ENSMUST00000215769 548 ntBASIC14.43□□□□□ -0.1
Lims1Q99JW4 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lims1Q99JW4 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.42□□□□□ -0.1
Lims1Q99JW4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lims1Q99JW4 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.41□□□□□ -0.1
Lims1Q99JW4 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.41□□□□□ -0.1
Lims1Q99JW4 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Lims1Q99JW4 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.41□□□□□ -0.1
Lims1Q99JW4 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Lims1Q99JW4 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.41□□□□□ -0.1
Lims1Q99JW4 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lims1Q99JW4 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lims1Q99JW4 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms