Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pcdha11Q91Y19 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Gm11780-201ENSMUST00000136880 516 ntBASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Gm10060-201ENSMUST00000212002 111 ntBASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Pcdha11Q91Y19 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha11Q91Y19 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha11Q91Y19 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha11Q91Y19 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha11Q91Y19 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha11Q91Y19 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha11Q91Y19 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Pcdha11Q91Y19 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.58■□□□□ 0.25
Pcdha11Q91Y19 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Gm15173-201ENSMUST00000122049 433 ntBASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Gm18733-201ENSMUST00000173950 856 ntBASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Pcdha11Q91Y19 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Pcdha11Q91Y19 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms