Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Gm14859-201ENSMUST00000117752 357 ntBASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb1Q91Y08 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb1Q91Y08 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Gm9172-201ENSMUST00000212092 954 ntBASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb1Q91Y08 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Gm15165-201ENSMUST00000118140 502 ntBASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb1Q91Y08 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms