Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhb3Q91XZ7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 AC130671.1-201ENSMUST00000227384 1237 ntBASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhb3Q91XZ7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Gm17661-201ENSMUST00000170317 270 ntBASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Gm18959-201ENSMUST00000208954 655 ntBASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhb3Q91XZ7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb3Q91XZ7 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb3Q91XZ7 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
Pcdhb3Q91XZ7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb3Q91XZ7 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb3Q91XZ7 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhb3Q91XZ7 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Gm7638-201ENSMUST00000121348 967 ntBASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Pcdhb3Q91XZ7 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhb3Q91XZ7 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms