Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb17Q91VD8 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb17Q91VD8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Gm24589-201ENSMUST00000116692 94 ntBASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Gm12497-201ENSMUST00000138778 237 ntBASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Gm6257-201ENSMUST00000163864 910 ntBASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Gm27459-201ENSMUST00000184860 107 ntBASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Gm43222-201ENSMUST00000199013 603 ntBASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Gm43452-201ENSMUST00000201873 991 ntBASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Gm45072-201ENSMUST00000208673 929 ntBASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Cmtm5-203ENSMUST00000227441 610 ntBASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Pcdhb17Q91VD8 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Gm44729-201ENSMUST00000206759 2052 ntBASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb17Q91VD8 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Gm14579-201ENSMUST00000117068 283 ntBASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Gm13830-205ENSMUST00000201195 1155 ntBASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Gm7506-201ENSMUST00000207758 815 ntBASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb17Q91VD8 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms