Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Gm4899-201ENSMUST00000178708 719 ntBASIC16.78■□□□□ 0.28
TraipQ8VIG6 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Gm7787-201ENSMUST00000216858 688 ntBASIC16.78■□□□□ 0.28
TraipQ8VIG6 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.78■□□□□ 0.28
TraipQ8VIG6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TraipQ8VIG6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Gm14722-201ENSMUST00000118943 689 ntBASIC16.77■□□□□ 0.28
TraipQ8VIG6 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Gm2213-201ENSMUST00000197485 688 ntBASIC16.77■□□□□ 0.28
TraipQ8VIG6 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.77■□□□□ 0.28
TraipQ8VIG6 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.77■□□□□ 0.28
TraipQ8VIG6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
TraipQ8VIG6 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TraipQ8VIG6 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TraipQ8VIG6 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TraipQ8VIG6 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TraipQ8VIG6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TraipQ8VIG6 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TraipQ8VIG6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TraipQ8VIG6 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
TraipQ8VIG6 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.76■□□□□ 0.27
TraipQ8VIG6 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Gm27300-201ENSMUST00000184085 97 ntBASIC16.76■□□□□ 0.27
TraipQ8VIG6 Gm27335-201ENSMUST00000184758 97 ntBASIC16.76■□□□□ 0.27
TraipQ8VIG6 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Gm10175-201ENSMUST00000086013 645 ntBASIC16.76■□□□□ 0.27
TraipQ8VIG6 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TraipQ8VIG6 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC16.75■□□□□ 0.27
TraipQ8VIG6 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TraipQ8VIG6 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.75■□□□□ 0.27
TraipQ8VIG6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TraipQ8VIG6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms