Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Gm5417-201ENSMUST00000079706 384 ntBASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh18Q8VHR0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh18Q8VHR0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Gm10252-201ENSMUST00000209541 832 ntBASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Pcdh18Q8VHR0 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh18Q8VHR0 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.27■□□□□ 0.03
Pcdh18Q8VHR0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.27■□□□□ 0.03
Pcdh18Q8VHR0 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh18Q8VHR0 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh18Q8VHR0 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Pcdh18Q8VHR0 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
Pcdh18Q8VHR0 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh18Q8VHR0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 AC167013.2-201ENSMUST00000228520 2684 ntBASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh18Q8VHR0 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms