Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rprd1aQ8VDS4 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm13884-201ENSMUST00000118103 829 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm44357-201ENSMUST00000195897 142 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm19658-201ENSMUST00000196231 138 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm44367-201ENSMUST00000196836 138 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm44350-201ENSMUST00000197197 138 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm44390-201ENSMUST00000197533 144 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm44313-201ENSMUST00000198018 138 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm44486-201ENSMUST00000198508 138 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm44314-201ENSMUST00000199263 138 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm44394-201ENSMUST00000199558 138 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm44484-201ENSMUST00000199873 138 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm44466-201ENSMUST00000200264 138 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Gm44359-201ENSMUST00000200671 138 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.25■□□□□ 0.19
Rprd1aQ8VDS4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Rps4l-201ENSMUST00000071745 943 ntBASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Gm43072-201ENSMUST00000200283 1671 ntBASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Rprd1aQ8VDS4 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm4609-201ENSMUST00000106443 1002 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm5138-201ENSMUST00000113842 1002 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm8097-201ENSMUST00000117903 829 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm15191-201ENSMUST00000117933 1000 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm12182-201ENSMUST00000118655 1008 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm13882-201ENSMUST00000120886 1002 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm10284-201ENSMUST00000145057 1005 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm10481-201ENSMUST00000179228 1002 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm2574-201ENSMUST00000181051 1002 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm3200-201ENSMUST00000181493 1002 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm8825-201ENSMUST00000182565 998 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm4518-201ENSMUST00000182638 718 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm8330-201ENSMUST00000182754 1008 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm4575-201ENSMUST00000182991 1002 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm8709-201ENSMUST00000183230 1012 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm6376-201ENSMUST00000209407 580 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm8655-201ENSMUST00000221159 852 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm10293-201ENSMUST00000076317 1002 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Gm6316-201ENSMUST00000082064 1020 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rprd1aQ8VDS4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms