Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ndc1Q8VCB1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Gm4459-201ENSMUST00000118750 468 ntBASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Gm4535-201ENSMUST00000182274 558 ntBASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Gm10355-201ENSMUST00000097146 517 ntBASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ndc1Q8VCB1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Gm13418-201ENSMUST00000119097 944 ntBASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Gm12497-201ENSMUST00000138778 237 ntBASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ndc1Q8VCB1 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Gm8097-201ENSMUST00000117903 829 ntBASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Gm25406-201ENSMUST00000157599 105 ntBASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Gm18206-201ENSMUST00000207027 926 ntBASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ndc1Q8VCB1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms