Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm9987-201ENSMUST00000069768 567 ntBASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.19■□□□□ 0.02
Lsm1Q8VC85 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Gm6623-201ENSMUST00000173570 544 ntBASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lsm1Q8VC85 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Lsm1Q8VC85 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Gm6257-201ENSMUST00000163864 910 ntBASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Gm6345-202ENSMUST00000180900 204 ntBASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Gm10231-201ENSMUST00000181584 441 ntBASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Gm5587-201ENSMUST00000206270 674 ntBASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Gm10175-202ENSMUST00000208752 441 ntBASIC15.16■□□□□ 0.02
Lsm1Q8VC85 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Lsm1Q8VC85 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Lsm1Q8VC85 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms