Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 AC164107.1-201ENSMUST00000227730 2161 ntBASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 Mir5133-201ENSMUST00000174955 77 ntBASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ccdc9Q8VC31 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC19.11■□□□□ 0.65
Ccdc9Q8VC31 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ccdc9Q8VC31 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Gm37820-201ENSMUST00000194021 2147 ntBASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ccdc9Q8VC31 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ccdc9Q8VC31 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
Ccdc9Q8VC31 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc9Q8VC31 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc9Q8VC31 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc9Q8VC31 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
Ccdc9Q8VC31 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC19.08■□□□□ 0.65
Ccdc9Q8VC31 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Ccdc9Q8VC31 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Ccdc9Q8VC31 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Kcnk16-202ENSMUST00000225596 2127 ntBASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ccdc9Q8VC31 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc9Q8VC31 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc9Q8VC31 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
Ccdc9Q8VC31 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ccdc9Q8VC31 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms