Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm10293-201ENSMUST00000076317 1002 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm6316-201ENSMUST00000082064 1020 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Gm10355-201ENSMUST00000097146 517 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.08
Chrna3Q8R4G9 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Chrna3Q8R4G9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna3Q8R4G9 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna3Q8R4G9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.52■□□□□ 0.07
Chrna3Q8R4G9 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna3Q8R4G9 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna3Q8R4G9 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna3Q8R4G9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Chrna3Q8R4G9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Chrna3Q8R4G9 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Chrna3Q8R4G9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Gm37584-201ENSMUST00000193595 1290 ntBASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Chrna3Q8R4G9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Gm13418-201ENSMUST00000119097 944 ntBASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Chrna3Q8R4G9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.48■□□□□ 0.07
Chrna3Q8R4G9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms