Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 AC069562.2-201ENSMUST00000224644 2146 ntBASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sf3a1Q8K4Z5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Gm43347-201ENSMUST00000200226 580 ntBASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3a1Q8K4Z5 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3a1Q8K4Z5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.33■□□□□ 0.69
Sf3a1Q8K4Z5 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3a1Q8K4Z5 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3a1Q8K4Z5 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3a1Q8K4Z5 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
Sf3a1Q8K4Z5 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3a1Q8K4Z5 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3a1Q8K4Z5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Gm4459-201ENSMUST00000118750 468 ntBASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Gm12497-201ENSMUST00000138778 237 ntBASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Gm6257-201ENSMUST00000163864 910 ntBASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3a1Q8K4Z5 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3a1Q8K4Z5 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms