Protein–RNA interactions for Protein: Q8K2Q9

Shtn1, Shootin-1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shtn1Q8K2Q9 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Gm9682-201ENSMUST00000197505 556 ntBASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Gm38318-201ENSMUST00000195769 1706 ntBASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Shtn1Q8K2Q9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Mir1895-201ENSMUST00000122615 79 ntBASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Shtn1Q8K2Q9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Shtn1Q8K2Q9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shtn1Q8K2Q9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shtn1Q8K2Q9 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shtn1Q8K2Q9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shtn1Q8K2Q9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC18.58■□□□□ 0.57
Shtn1Q8K2Q9 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Shtn1Q8K2Q9 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Shtn1Q8K2Q9 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.58■□□□□ 0.56
Shtn1Q8K2Q9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shtn1Q8K2Q9 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shtn1Q8K2Q9 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shtn1Q8K2Q9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Shtn1Q8K2Q9 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Shtn1Q8K2Q9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC18.58■□□□□ 0.56
Shtn1Q8K2Q9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Gm15358-201ENSMUST00000119249 520 ntBASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Gm11745-201ENSMUST00000121669 448 ntBASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Shtn1Q8K2Q9 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Gm5177-201ENSMUST00000183092 997 ntBASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Gm5312-201ENSMUST00000203728 547 ntBASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Shtn1Q8K2Q9 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shtn1Q8K2Q9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shtn1Q8K2Q9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shtn1Q8K2Q9 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Shtn1Q8K2Q9 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Shtn1Q8K2Q9 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shtn1Q8K2Q9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shtn1Q8K2Q9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Shtn1Q8K2Q9 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms