Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Rtn1Q8K0T0 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Gm34391-201ENSMUST00000203706 907 ntBASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Rtn1Q8K0T0 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Gm17971-201ENSMUST00000190239 806 ntBASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 AC160338.1-201ENSMUST00000214232 705 ntBASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Rtn1Q8K0T0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Gm42790-201ENSMUST00000201268 969 ntBASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Rtn1Q8K0T0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.21■□□□□ 0.51
Rtn1Q8K0T0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms