Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Hmgcs1Q8JZK9 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Gm6623-201ENSMUST00000173570 544 ntBASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Hmgcs1Q8JZK9 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Gm13836-201ENSMUST00000121159 501 ntBASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hmgcs1Q8JZK9 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Gm9013-201ENSMUST00000132939 882 ntBASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Gm6345-202ENSMUST00000180900 204 ntBASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hmgcs1Q8JZK9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
Hmgcs1Q8JZK9 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms