Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Haglr-201ENSMUST00000100000 2085 ntBASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Gm12490-201ENSMUST00000120255 560 ntBASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Gm44855-201ENSMUST00000205725 362 ntBASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rp1l1Q8CGM2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rp1l1Q8CGM2 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Gm13453-201ENSMUST00000118708 357 ntBASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rp1l1Q8CGM2 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rp1l1Q8CGM2 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.27■□□□□ 0.19
Rp1l1Q8CGM2 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rp1l1Q8CGM2 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rp1l1Q8CGM2 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC16.27■□□□□ 0.19
Rp1l1Q8CGM2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rp1l1Q8CGM2 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.27■□□□□ 0.19
Rp1l1Q8CGM2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rp1l1Q8CGM2 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rp1l1Q8CGM2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rp1l1Q8CGM2 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rp1l1Q8CGM2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Gm14127-201ENSMUST00000117906 678 ntBASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rp1l1Q8CGM2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rp1l1Q8CGM2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms