Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Rbm28Q8CGC6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Gm11780-201ENSMUST00000136880 516 ntBASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Rbm28Q8CGC6 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Gm6089-201ENSMUST00000197666 938 ntBASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Rbm28Q8CGC6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rbm28Q8CGC6 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Rbm28Q8CGC6 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Rbm28Q8CGC6 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Rbm28Q8CGC6 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms