Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Gm7367-201ENSMUST00000057611 492 ntBASIC19.56■□□□□ 0.72
Smc5Q8CG46 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.56■□□□□ 0.72
Smc5Q8CG46 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC19.55■□□□□ 0.72
Smc5Q8CG46 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Smc5Q8CG46 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc5Q8CG46 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Smc5Q8CG46 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC19.53■□□□□ 0.72
Smc5Q8CG46 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Smc5Q8CG46 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc5Q8CG46 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc5Q8CG46 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Smc5Q8CG46 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.53■□□□□ 0.72
Smc5Q8CG46 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Smc5Q8CG46 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Smc5Q8CG46 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Smc5Q8CG46 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC19.53■□□□□ 0.72
Smc5Q8CG46 Gm9768-201ENSMUST00000206007 2861 ntBASIC19.53■□□□□ 0.72
Smc5Q8CG46 Prkcz2-201ENSMUST00000206136 1756 ntBASIC19.52■□□□□ 0.72
Smc5Q8CG46 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Gm7507-201ENSMUST00000183053 1008 ntBASIC19.52■□□□□ 0.72
Smc5Q8CG46 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc5Q8CG46 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.52■□□□□ 0.72
Smc5Q8CG46 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Smc5Q8CG46 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
Smc5Q8CG46 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc5Q8CG46 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc5Q8CG46 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Smc5Q8CG46 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc5Q8CG46 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc5Q8CG46 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Smc5Q8CG46 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Gm16425-201ENSMUST00000118143 3130 ntBASIC19.51■□□□□ 0.71
Smc5Q8CG46 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Smc5Q8CG46 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms