Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhb7Q8CDY9 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 AC073947.1-201ENSMUST00000216991 649 ntBASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdhb7Q8CDY9 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Gm11950-201ENSMUST00000121615 838 ntBASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Gm6345-202ENSMUST00000180900 204 ntBASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Gm44430-201ENSMUST00000203376 995 ntBASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Gm32996-201ENSMUST00000199828 1447 ntBASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdhb7Q8CDY9 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdhb7Q8CDY9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms