Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.56■□□□□ 0.88
Rsph6aQ8CDR2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph6aQ8CDR2 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
Rsph6aQ8CDR2 Gm7229-201ENSMUST00000214719 1007 ntBASIC20.56■□□□□ 0.88
Rsph6aQ8CDR2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph6aQ8CDR2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph6aQ8CDR2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph6aQ8CDR2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rsph6aQ8CDR2 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Gm13597-201ENSMUST00000121239 375 ntBASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Gm27702-201ENSMUST00000184512 56 ntBASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rsph6aQ8CDR2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 AC151836.1-202ENSMUST00000226259 753 ntBASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rsph6aQ8CDR2 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Gm45244-201ENSMUST00000211328 2200 ntBASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Mir3113-201ENSMUST00000175478 76 ntBASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Gm2213-201ENSMUST00000197485 688 ntBASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rsph6aQ8CDR2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rsph6aQ8CDR2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms