Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Rprl3-201ENSMUST00000157400 290 ntBASIC18.39■□□□□ 0.53
Vps53Q8CCB4 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Dancr-204ENSMUST00000132389 2347 ntBASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.39■□□□□ 0.53
Vps53Q8CCB4 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Vps53Q8CCB4 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Vps53Q8CCB4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Gm2651-201ENSMUST00000203560 838 ntBASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 AC161829.1-201ENSMUST00000220298 281 ntBASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Vps53Q8CCB4 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Gm32996-201ENSMUST00000199828 1447 ntBASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Gm13312-201ENSMUST00000119631 718 ntBASIC18.35■□□□□ 0.53
Vps53Q8CCB4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms