Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Lysmd4Q8CC84 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lysmd4Q8CC84 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Lysmd4Q8CC84 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Lysmd4Q8CC84 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.21□□□□□ -0.14
Lysmd4Q8CC84 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.21□□□□□ -0.14
Lysmd4Q8CC84 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Lysmd4Q8CC84 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Lysmd4Q8CC84 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Gm37736-201ENSMUST00000193564 2802 ntBASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Lysmd4Q8CC84 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Gm16061-201ENSMUST00000122167 857 ntBASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 AC135963.1-201ENSMUST00000211640 717 ntBASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Gm7213-201ENSMUST00000215977 950 ntBASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Lysmd4Q8CC84 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Gm13474-201ENSMUST00000122466 815 ntBASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Lysmd4Q8CC84 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Lysmd4Q8CC84 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms