Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC15.31■□□□□ 0.04
SynpoQ8CC35 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Gm10052-201ENSMUST00000168019 960 ntBASIC15.31■□□□□ 0.04
SynpoQ8CC35 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Mir8098-201ENSMUST00000184011 137 ntBASIC15.31■□□□□ 0.04
SynpoQ8CC35 Gm27459-201ENSMUST00000184860 107 ntBASIC15.31■□□□□ 0.04
SynpoQ8CC35 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Gm7729-201ENSMUST00000050143 801 ntBASIC15.31■□□□□ 0.04
SynpoQ8CC35 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.31■□□□□ 0.04
SynpoQ8CC35 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SynpoQ8CC35 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Rprl3-201ENSMUST00000157400 290 ntBASIC15.3■□□□□ 0.04
SynpoQ8CC35 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Gm44771-201ENSMUST00000206975 626 ntBASIC15.3■□□□□ 0.04
SynpoQ8CC35 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.3■□□□□ 0.04
SynpoQ8CC35 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SynpoQ8CC35 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Gm15372-201ENSMUST00000120729 834 ntBASIC15.29■□□□□ 0.04
SynpoQ8CC35 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.29■□□□□ 0.04
SynpoQ8CC35 AC164629.2-201ENSMUST00000217916 270 ntBASIC15.29■□□□□ 0.04
SynpoQ8CC35 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 AC115863.1-201ENSMUST00000214815 1813 ntBASIC15.29■□□□□ 0.04
SynpoQ8CC35 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SynpoQ8CC35 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
SynpoQ8CC35 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.28■□□□□ 0.04
SynpoQ8CC35 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms