Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Gm2308-201ENSMUST00000166539 1004 ntBASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Gm2213-201ENSMUST00000197485 688 ntBASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.31■□□□□ 0.52
Shisa4Q8CA71 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Shisa4Q8CA71 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Gm6550-201ENSMUST00000187574 993 ntBASIC18.3■□□□□ 0.52
Shisa4Q8CA71 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Gm19164-201ENSMUST00000210667 640 ntBASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.3■□□□□ 0.52
Shisa4Q8CA71 AC154757.1-201ENSMUST00000228289 336 ntBASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Shisa4Q8CA71 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Shisa4Q8CA71 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.28■□□□□ 0.52
Shisa4Q8CA71 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Shisa4Q8CA71 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms