Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Alx1Q8C8B0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Gm12350-201ENSMUST00000121208 462 ntBASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Alx1Q8C8B0 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Gm15173-201ENSMUST00000122049 433 ntBASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Mir5131-201ENSMUST00000175426 93 ntBASIC18.41■□□□□ 0.54
Alx1Q8C8B0 AV026068-213ENSMUST00000223675 1171 ntBASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Alx1Q8C8B0 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Dancr-204ENSMUST00000132389 2347 ntBASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Gm11764-201ENSMUST00000120221 623 ntBASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Mir5126-201ENSMUST00000175513 77 ntBASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Alx1Q8C8B0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Alx1Q8C8B0 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Alx1Q8C8B0 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
Alx1Q8C8B0 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Gm2651-201ENSMUST00000203560 838 ntBASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 AC122024.2-201ENSMUST00000220086 871 ntBASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.39■□□□□ 0.53
Alx1Q8C8B0 App-207ENSMUST00000227737 2827 ntBASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC18.39■□□□□ 0.53
Alx1Q8C8B0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Gm18733-201ENSMUST00000173950 856 ntBASIC18.38■□□□□ 0.53
Alx1Q8C8B0 Gm7286-201ENSMUST00000182691 1007 ntBASIC18.38■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms