Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Col6a6Q8C6K9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Rprl2-201ENSMUST00000157150 290 ntBASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col6a6Q8C6K9 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Gm43125-201ENSMUST00000201724 730 ntBASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Gm18246-201ENSMUST00000221023 728 ntBASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col6a6Q8C6K9 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col6a6Q8C6K9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Gm9682-201ENSMUST00000197505 556 ntBASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col6a6Q8C6K9 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms