Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC18.5■□□□□ 0.55
Usp44Q8C2S0 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Gm37584-201ENSMUST00000193595 1290 ntBASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Gm6296-201ENSMUST00000222599 943 ntBASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Usp44Q8C2S0 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC18.49■□□□□ 0.55
Usp44Q8C2S0 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Usp44Q8C2S0 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Gm13337-201ENSMUST00000119183 1594 ntBASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Gm19164-201ENSMUST00000210667 640 ntBASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Gm27528-202ENSMUST00000222916 2012 ntBASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Usp44Q8C2S0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms