Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Sh3rf3Q8C120 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Gm14859-201ENSMUST00000117752 357 ntBASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Mir6404-201ENSMUST00000183699 94 ntBASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Sh3rf3Q8C120 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.47■□□□□ 0.23
Sh3rf3Q8C120 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sh3rf3Q8C120 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sh3rf3Q8C120 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sh3rf3Q8C120 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sh3rf3Q8C120 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Sh3rf3Q8C120 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Sh3rf3Q8C120 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms