Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Gm27463-201ENSMUST00000183569 57 ntBASIC13.99□□□□□ -0.17
SprnQ8BWU1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
SprnQ8BWU1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.98□□□□□ -0.17
SprnQ8BWU1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
SprnQ8BWU1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.97□□□□□ -0.17
SprnQ8BWU1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Efs-202ENSMUST00000227037 2540 ntBASIC13.97□□□□□ -0.17
SprnQ8BWU1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SprnQ8BWU1 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.96□□□□□ -0.17
SprnQ8BWU1 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SprnQ8BWU1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SprnQ8BWU1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SprnQ8BWU1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SprnQ8BWU1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SprnQ8BWU1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SprnQ8BWU1 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SprnQ8BWU1 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SprnQ8BWU1 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SprnQ8BWU1 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SprnQ8BWU1 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms