Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 AC151836.1-202ENSMUST00000226259 753 ntBASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Gm38327-201ENSMUST00000195852 1755 ntBASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Gm44729-201ENSMUST00000206759 2052 ntBASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Scfd1Q8BRF7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Mir8117-201ENSMUST00000184773 107 ntBASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Scfd1Q8BRF7 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scfd1Q8BRF7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Scfd1Q8BRF7 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Scfd1Q8BRF7 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Scfd1Q8BRF7 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Gm43072-201ENSMUST00000200283 1671 ntBASIC18■□□□□ 0.47
Scfd1Q8BRF7 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Gm4995-201ENSMUST00000117247 432 ntBASIC18■□□□□ 0.47
Scfd1Q8BRF7 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Gm10175-201ENSMUST00000086013 645 ntBASIC18■□□□□ 0.47
Scfd1Q8BRF7 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18■□□□□ 0.47
Scfd1Q8BRF7 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Scfd1Q8BRF7 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms