Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.76■□□□□ 0.27
Rd3Q8BRE0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Mir3113-201ENSMUST00000175478 76 ntBASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rd3Q8BRE0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Gm11764-201ENSMUST00000120221 623 ntBASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rd3Q8BRE0 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Gm8344-201ENSMUST00000119813 856 ntBASIC16.73■□□□□ 0.27
Rd3Q8BRE0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rd3Q8BRE0 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rd3Q8BRE0 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.71■□□□□ 0.27
Rd3Q8BRE0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms