Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rab11fip4Q8BQP8 Prob1-201ENSMUST00000097619 3021 ntBASIC17.52■□□□□ 0.39
Rab11fip4Q8BQP8 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.52■□□□□ 0.39
Rab11fip4Q8BQP8 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rab11fip4Q8BQP8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rab11fip4Q8BQP8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rab11fip4Q8BQP8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.52■□□□□ 0.39
Rab11fip4Q8BQP8 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Rab11fip4Q8BQP8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 App-207ENSMUST00000227737 2827 ntBASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Rab11fip4Q8BQP8 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Gm44430-201ENSMUST00000203376 995 ntBASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Rab11fip4Q8BQP8 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Gm18195-201ENSMUST00000207604 706 ntBASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Wnt10b-206ENSMUST00000228546 2709 ntBASIC17.49■□□□□ 0.39
Rab11fip4Q8BQP8 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Rab11fip4Q8BQP8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Rab11fip4Q8BQP8 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip4Q8BQP8 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip4Q8BQP8 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Rab11fip4Q8BQP8 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip4Q8BQP8 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip4Q8BQP8 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
Rab11fip4Q8BQP8 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.48■□□□□ 0.39
Rab11fip4Q8BQP8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Rab11fip4Q8BQP8 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms