Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm21559-201ENSMUST00000220638 855 ntBASIC15.02■□□□□ -0
Ckap4Q8BMK4 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.02■□□□□ -0
Ckap4Q8BMK4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ckap4Q8BMK4 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ckap4Q8BMK4 Gm8587-201ENSMUST00000076538 843 ntBASIC15.02■□□□□ -0
Ckap4Q8BMK4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ckap4Q8BMK4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.02□□□□□ -0.01
Ckap4Q8BMK4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap4Q8BMK4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap4Q8BMK4 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap4Q8BMK4 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap4Q8BMK4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ckap4Q8BMK4 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ckap4Q8BMK4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Gm3272-201ENSMUST00000181181 1229 ntBASIC15□□□□□ -0.01
Ckap4Q8BMK4 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Gm10566-201ENSMUST00000086739 996 ntBASIC15□□□□□ -0.01
Ckap4Q8BMK4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ckap4Q8BMK4 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Gm11355-201ENSMUST00000121120 306 ntBASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Gm44450-201ENSMUST00000199528 114 ntBASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ckap4Q8BMK4 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ckap4Q8BMK4 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms