Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Chmp2bQ8BJF9 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Gm37722-201ENSMUST00000193757 208 ntBASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Chmp2bQ8BJF9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Chmp2bQ8BJF9 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp2bQ8BJF9 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Chmp2bQ8BJF9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Sybu-209ENSMUST00000228639 4113 ntBASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Chmp2bQ8BJF9 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Chmp2bQ8BJF9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms