Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Slc5a7Q8BGY9 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.92□□□□□ -0.18
Slc5a7Q8BGY9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc5a7Q8BGY9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc5a7Q8BGY9 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc5a7Q8BGY9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc5a7Q8BGY9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc5a7Q8BGY9 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Slc5a7Q8BGY9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.92□□□□□ -0.18
Slc5a7Q8BGY9 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Gm18666-201ENSMUST00000190039 958 ntBASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Slc5a7Q8BGY9 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Gm12933-201ENSMUST00000120203 872 ntBASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Gm7791-201ENSMUST00000219066 539 ntBASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Gm18115-201ENSMUST00000221209 621 ntBASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Slc5a7Q8BGY9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Slc5a7Q8BGY9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Slc5a7Q8BGY9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Slc5a7Q8BGY9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Slc5a7Q8BGY9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Nrn1-203ENSMUST00000223611 1443 ntBASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Slc5a7Q8BGY9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Slc5a7Q8BGY9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms