Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Gm27742-201ENSMUST00000184667 60 ntBASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Samm50Q8BGH2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
Samm50Q8BGH2 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Gm17807-201ENSMUST00000186869 298 ntBASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Samm50Q8BGH2 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Gm9103-201ENSMUST00000119371 405 ntBASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Samm50Q8BGH2 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Samm50Q8BGH2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms