Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trim6Q8BGE7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trim6Q8BGE7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Gm16061-201ENSMUST00000122167 857 ntBASIC16.83■□□□□ 0.28
Trim6Q8BGE7 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Gm2274-201ENSMUST00000184539 609 ntBASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Gm29707-201ENSMUST00000196325 491 ntBASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trim6Q8BGE7 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Gm11336-201ENSMUST00000118168 334 ntBASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.82■□□□□ 0.28
Trim6Q8BGE7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.82■□□□□ 0.28
Trim6Q8BGE7 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Gm32996-201ENSMUST00000199828 1447 ntBASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trim6Q8BGE7 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms