Protein–RNA interactions for Protein: Q811W0

Sox21, Transcription factor SOX-21, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox21Q811W0 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Sox21Q811W0 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox21Q811W0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC12.93□□□□□ -0.34
Sox21Q811W0 Gm13418-201ENSMUST00000119097 944 ntBASIC12.93□□□□□ -0.34
Sox21Q811W0 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC12.93□□□□□ -0.34
Sox21Q811W0 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.93□□□□□ -0.34
Sox21Q811W0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.93□□□□□ -0.34
Sox21Q811W0 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.93□□□□□ -0.34
Sox21Q811W0 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Sox21Q811W0 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.93□□□□□ -0.34
Sox21Q811W0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.93□□□□□ -0.34
Sox21Q811W0 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Sox21Q811W0 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Sox21Q811W0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Sox21Q811W0 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.92□□□□□ -0.34
Sox21Q811W0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.92□□□□□ -0.34
Sox21Q811W0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox21Q811W0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sox21Q811W0 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox21Q811W0 Gm10060-201ENSMUST00000212002 111 ntBASIC12.92□□□□□ -0.34
Sox21Q811W0 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.92□□□□□ -0.34
Sox21Q811W0 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Sox21Q811W0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC12.92□□□□□ -0.34
Sox21Q811W0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Sox21Q811W0 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Sox21Q811W0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Sox21Q811W0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox21Q811W0 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox21Q811W0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox21Q811W0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Sox21Q811W0 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.91□□□□□ -0.34
Sox21Q811W0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Gm36967-201ENSMUST00000193814 266 ntBASIC12.91□□□□□ -0.34
Sox21Q811W0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox21Q811W0 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.91□□□□□ -0.34
Sox21Q811W0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox21Q811W0 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Sox21Q811W0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.91□□□□□ -0.34
Sox21Q811W0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Sox21Q811W0 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Sox21Q811W0 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms