Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC20.25■□□□□ 0.83
Shank2Q80Z38 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Gm29541-201ENSMUST00000191351 678 ntBASIC20.25■□□□□ 0.83
Shank2Q80Z38 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Gm9794-201ENSMUST00000202370 423 ntBASIC20.25■□□□□ 0.83
Shank2Q80Z38 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 AC132863.2-201ENSMUST00000226643 799 ntBASIC20.25■□□□□ 0.83
Shank2Q80Z38 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC20.25■□□□□ 0.83
Shank2Q80Z38 Gm10154-201ENSMUST00000084445 354 ntBASIC20.25■□□□□ 0.83
Shank2Q80Z38 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shank2Q80Z38 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Shank2Q80Z38 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC20.24■□□□□ 0.83
Shank2Q80Z38 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Shank2Q80Z38 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank2Q80Z38 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank2Q80Z38 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank2Q80Z38 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank2Q80Z38 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank2Q80Z38 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank2Q80Z38 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shank2Q80Z38 AC025913.2-201ENSMUST00000220136 1766 ntBASIC20.24■□□□□ 0.83
Shank2Q80Z38 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Shank2Q80Z38 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Gm15487-201ENSMUST00000122373 465 ntBASIC20.22■□□□□ 0.83
Shank2Q80Z38 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Gm25144-201ENSMUST00000179561 110 ntBASIC20.22■□□□□ 0.83
Shank2Q80Z38 Gm25352-201ENSMUST00000179815 110 ntBASIC20.22■□□□□ 0.83
Shank2Q80Z38 Gm27680-201ENSMUST00000184192 160 ntBASIC20.22■□□□□ 0.83
Shank2Q80Z38 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Gm6888-201ENSMUST00000221983 706 ntBASIC20.22■□□□□ 0.83
Shank2Q80Z38 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Shank2Q80Z38 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shank2Q80Z38 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Shank2Q80Z38 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Gm9824-201ENSMUST00000178707 561 ntBASIC20.21■□□□□ 0.83
Shank2Q80Z38 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Cdk7-205ENSMUST00000225990 1159 ntBASIC20.21■□□□□ 0.83
Shank2Q80Z38 AC132467.2-202ENSMUST00000227726 559 ntBASIC20.21■□□□□ 0.83
Shank2Q80Z38 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank2Q80Z38 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shank2Q80Z38 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank2Q80Z38 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC20.2■□□□□ 0.82
Shank2Q80Z38 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank2Q80Z38 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Shank2Q80Z38 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC20.2■□□□□ 0.82
Shank2Q80Z38 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Shank2Q80Z38 Gm28630-201ENSMUST00000187806 498 ntBASIC20.2■□□□□ 0.82
Shank2Q80Z38 Gm44855-201ENSMUST00000205725 362 ntBASIC20.2■□□□□ 0.82
Shank2Q80Z38 AC135669.1-201ENSMUST00000213585 412 ntBASIC20.2■□□□□ 0.82
Shank2Q80Z38 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Shank2Q80Z38 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank2Q80Z38 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shank2Q80Z38 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms