Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Nucks1Q80XU3 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 AC163637.1-201ENSMUST00000215491 1894 ntBASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nucks1Q80XU3 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Mir6404-201ENSMUST00000183699 94 ntBASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nucks1Q80XU3 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nucks1Q80XU3 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Gm11950-201ENSMUST00000121615 838 ntBASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Gm6345-202ENSMUST00000180900 204 ntBASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nucks1Q80XU3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Nucks1Q80XU3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Nucks1Q80XU3 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms