Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trim36Q80WG7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Trim36Q80WG7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.3■□□□□ 0.04
Trim36Q80WG7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim36Q80WG7 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trim36Q80WG7 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.29■□□□□ 0.04
Trim36Q80WG7 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Sybu-209ENSMUST00000228639 4113 ntBASIC15.29■□□□□ 0.04
Trim36Q80WG7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trim36Q80WG7 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.28■□□□□ 0.04
Trim36Q80WG7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trim36Q80WG7 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim36Q80WG7 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.27■□□□□ 0.04
Trim36Q80WG7 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.27■□□□□ 0.04
Trim36Q80WG7 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trim36Q80WG7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms