Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Tnrc18Q80WC3 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Tnrc18Q80WC3 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Tnrc18Q80WC3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Tnrc18Q80WC3 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnrc18Q80WC3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnrc18Q80WC3 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnrc18Q80WC3 Gm14928-201ENSMUST00000120198 477 ntBASIC15.58■□□□□ 0.09
Tnrc18Q80WC3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.58■□□□□ 0.09
Tnrc18Q80WC3 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Tnrc18Q80WC3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.58■□□□□ 0.09
Tnrc18Q80WC3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Gm9063-201ENSMUST00000223299 582 ntBASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Tnrc18Q80WC3 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Gm3365-201ENSMUST00000216296 1480 ntBASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Gm43630-201ENSMUST00000201550 776 ntBASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Gm9794-201ENSMUST00000202370 423 ntBASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 AC154239.3-201ENSMUST00000226933 674 ntBASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Tnrc18Q80WC3 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc18Q80WC3 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc18Q80WC3 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc18Q80WC3 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc18Q80WC3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
Tnrc18Q80WC3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC15.56■□□□□ 0.08
Tnrc18Q80WC3 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc18Q80WC3 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.56■□□□□ 0.08
Tnrc18Q80WC3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tnrc18Q80WC3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms