Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Otop1Q80VM9 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Otop1Q80VM9 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Otop1Q80VM9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Otop1Q80VM9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Gm11764-201ENSMUST00000120221 623 ntBASIC15.16■□□□□ 0.02
Otop1Q80VM9 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.16■□□□□ 0.02
Otop1Q80VM9 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Otop1Q80VM9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Otop1Q80VM9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Gm11025-201ENSMUST00000140773 466 ntBASIC15.15■□□□□ 0.02
Otop1Q80VM9 Gm27646-201ENSMUST00000183989 110 ntBASIC15.15■□□□□ 0.02
Otop1Q80VM9 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.15■□□□□ 0.02
Otop1Q80VM9 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Otop1Q80VM9 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Otop1Q80VM9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Gm17271-201ENSMUST00000165535 355 ntBASIC15.14■□□□□ 0.01
Otop1Q80VM9 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Gm5682-201ENSMUST00000173402 505 ntBASIC15.14■□□□□ 0.01
Otop1Q80VM9 Gm44945-201ENSMUST00000206764 1187 ntBASIC15.14■□□□□ 0.01
Otop1Q80VM9 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Otop1Q80VM9 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
Otop1Q80VM9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Otop1Q80VM9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Otop1Q80VM9 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Otop1Q80VM9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Otop1Q80VM9 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms