Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim62Q80V85 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim62Q80V85 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim62Q80V85 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim62Q80V85 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.35■□□□□ 0.21
Trim62Q80V85 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim62Q80V85 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.35■□□□□ 0.21
Trim62Q80V85 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim62Q80V85 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim62Q80V85 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.34■□□□□ 0.21
Trim62Q80V85 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim62Q80V85 Gm18195-201ENSMUST00000207604 706 ntBASIC16.34■□□□□ 0.21
Trim62Q80V85 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim62Q80V85 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim62Q80V85 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim62Q80V85 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim62Q80V85 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim62Q80V85 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trim62Q80V85 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim62Q80V85 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim62Q80V85 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Trim62Q80V85 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim62Q80V85 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm44357-201ENSMUST00000195897 142 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm19658-201ENSMUST00000196231 138 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm44367-201ENSMUST00000196836 138 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm44350-201ENSMUST00000197197 138 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm44390-201ENSMUST00000197533 144 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm44313-201ENSMUST00000198018 138 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm44486-201ENSMUST00000198508 138 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm44314-201ENSMUST00000199263 138 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm44394-201ENSMUST00000199558 138 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm44484-201ENSMUST00000199873 138 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm44466-201ENSMUST00000200264 138 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Gm44359-201ENSMUST00000200671 138 ntBASIC16.33■□□□□ 0.2
Trim62Q80V85 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Trim62Q80V85 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim62Q80V85 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim62Q80V85 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim62Q80V85 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim62Q80V85 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim62Q80V85 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Trim62Q80V85 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim62Q80V85 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim62Q80V85 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim62Q80V85 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim62Q80V85 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trim62Q80V85 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Trim62Q80V85 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Trim62Q80V85 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC16.32■□□□□ 0.2
Trim62Q80V85 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.32■□□□□ 0.2
Trim62Q80V85 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.32■□□□□ 0.2
Trim62Q80V85 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trim62Q80V85 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim62Q80V85 Gm13884-201ENSMUST00000118103 829 ntBASIC16.31■□□□□ 0.2
Trim62Q80V85 Gm5864-201ENSMUST00000202263 970 ntBASIC16.31■□□□□ 0.2
Trim62Q80V85 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC16.31■□□□□ 0.2
Trim62Q80V85 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Gm6296-201ENSMUST00000222599 943 ntBASIC16.31■□□□□ 0.2
Trim62Q80V85 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trim62Q80V85 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms