Protein–RNA interactions for Protein: Q7TNM2

Trim46, Tripartite motif-containing protein 46, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim46Q7TNM2 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Gm33142-201ENSMUST00000193913 867 ntBASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim46Q7TNM2 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Gm6257-201ENSMUST00000163864 910 ntBASIC14.84□□□□□ -0.03
Trim46Q7TNM2 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trim46Q7TNM2 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim46Q7TNM2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim46Q7TNM2 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim46Q7TNM2 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
Trim46Q7TNM2 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim46Q7TNM2 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim46Q7TNM2 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Gm25406-201ENSMUST00000157599 105 ntBASIC14.82□□□□□ -0.04
Trim46Q7TNM2 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Gm44454-201ENSMUST00000198541 138 ntBASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim46Q7TNM2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms