Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ddx58Q6Q899 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.52■□□□□ 0.71
Ddx58Q6Q899 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Ddx58Q6Q899 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.52■□□□□ 0.71
Ddx58Q6Q899 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Gm11594-201ENSMUST00000122313 162 ntBASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Gm18489-201ENSMUST00000172565 551 ntBASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 AC122024.2-201ENSMUST00000220086 871 ntBASIC19.51■□□□□ 0.71
Ddx58Q6Q899 AC131709.1-201ENSMUST00000224731 1180 ntBASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Gm43072-201ENSMUST00000200283 1671 ntBASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Gm44729-201ENSMUST00000206759 2052 ntBASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ddx58Q6Q899 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Gm14494-201ENSMUST00000118786 435 ntBASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Gm4899-201ENSMUST00000178708 719 ntBASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Gm5867-201ENSMUST00000063197 592 ntBASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ddx58Q6Q899 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Gm9682-201ENSMUST00000197505 556 ntBASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Gm45683-201ENSMUST00000210825 1247 ntBASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 AC147366.1-201ENSMUST00000227671 852 ntBASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ddx58Q6Q899 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx58Q6Q899 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.48■□□□□ 0.71
Ddx58Q6Q899 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx58Q6Q899 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.48■□□□□ 0.71
Ddx58Q6Q899 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC19.48■□□□□ 0.71
Ddx58Q6Q899 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC19.48■□□□□ 0.71
Ddx58Q6Q899 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC19.48■□□□□ 0.71
Ddx58Q6Q899 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ddx58Q6Q899 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Ddx58Q6Q899 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Ddx58Q6Q899 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Ddx58Q6Q899 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms