Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Auts2-212ENSMUST00000178555 309 ntBASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Gm20553-201ENSMUST00000204205 844 ntBASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Nup98Q6PFD9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Gm17271-201ENSMUST00000165535 355 ntBASIC18.48■□□□□ 0.55
Nup98Q6PFD9 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nup98Q6PFD9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC18.47■□□□□ 0.55
Nup98Q6PFD9 AC131187.1-201ENSMUST00000224567 809 ntBASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nup98Q6PFD9 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Gm10154-201ENSMUST00000084445 354 ntBASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Gpr146-202ENSMUST00000053120 1040 ntBASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nup98Q6PFD9 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC18.46■□□□□ 0.54
Nup98Q6PFD9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Gm11025-201ENSMUST00000140773 466 ntBASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Gm7901-201ENSMUST00000120430 1597 ntBASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nup98Q6PFD9 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Rprl2-201ENSMUST00000157150 290 ntBASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Nup98Q6PFD9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms