Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.88□□□□□ -0.19
Snrnp40Q6PE01 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Gm36858-201ENSMUST00000194501 2391 ntBASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Gm11745-201ENSMUST00000121669 448 ntBASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Gm6257-201ENSMUST00000163864 910 ntBASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.87□□□□□ -0.19
Snrnp40Q6PE01 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Snrnp40Q6PE01 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Mir6990-201ENSMUST00000183724 91 ntBASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.85□□□□□ -0.19
Snrnp40Q6PE01 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Snrnp40Q6PE01 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms