Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17■□□□□ 0.31
ShbQ6PD21 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ShbQ6PD21 Gm43182-201ENSMUST00000199476 2528 ntBASIC17■□□□□ 0.31
ShbQ6PD21 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17■□□□□ 0.31
ShbQ6PD21 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ShbQ6PD21 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Syt7-204ENSMUST00000223586 1344 ntBASIC16.99■□□□□ 0.31
ShbQ6PD21 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ShbQ6PD21 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Gm18737-201ENSMUST00000173594 937 ntBASIC16.99■□□□□ 0.31
ShbQ6PD21 Gm25144-201ENSMUST00000179561 110 ntBASIC16.99■□□□□ 0.31
ShbQ6PD21 Gm25352-201ENSMUST00000179815 110 ntBASIC16.99■□□□□ 0.31
ShbQ6PD21 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.99■□□□□ 0.31
ShbQ6PD21 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC16.99■□□□□ 0.31
ShbQ6PD21 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.99■□□□□ 0.31
ShbQ6PD21 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.99■□□□□ 0.31
ShbQ6PD21 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
ShbQ6PD21 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ShbQ6PD21 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.98■□□□□ 0.31
ShbQ6PD21 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ShbQ6PD21 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ShbQ6PD21 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC16.98■□□□□ 0.31
ShbQ6PD21 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
ShbQ6PD21 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
ShbQ6PD21 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ShbQ6PD21 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ShbQ6PD21 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.98■□□□□ 0.31
ShbQ6PD21 Gm28630-201ENSMUST00000187806 498 ntBASIC16.98■□□□□ 0.31
ShbQ6PD21 Gm38225-201ENSMUST00000194001 393 ntBASIC16.98■□□□□ 0.31
ShbQ6PD21 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ShbQ6PD21 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ShbQ6PD21 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
ShbQ6PD21 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ShbQ6PD21 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
ShbQ6PD21 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ShbQ6PD21 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShbQ6PD21 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ShbQ6PD21 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShbQ6PD21 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.97■□□□□ 0.31
ShbQ6PD21 Gm8410-201ENSMUST00000117225 605 ntBASIC16.97■□□□□ 0.31
ShbQ6PD21 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.97■□□□□ 0.31
ShbQ6PD21 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShbQ6PD21 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ShbQ6PD21 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
ShbQ6PD21 AC124732.1-201ENSMUST00000221551 910 ntBASIC16.97■□□□□ 0.31
ShbQ6PD21 Gm25857-201ENSMUST00000082788 129 ntBASIC16.97■□□□□ 0.31
ShbQ6PD21 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ShbQ6PD21 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ShbQ6PD21 Haglr-201ENSMUST00000100000 2085 ntBASIC16.97■□□□□ 0.31
ShbQ6PD21 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.96■□□□□ 0.31
ShbQ6PD21 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.96■□□□□ 0.31
ShbQ6PD21 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
ShbQ6PD21 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Gm13015-201ENSMUST00000118674 204 ntBASIC16.96■□□□□ 0.31
ShbQ6PD21 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC16.96■□□□□ 0.31
ShbQ6PD21 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
ShbQ6PD21 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ShbQ6PD21 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
ShbQ6PD21 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.95■□□□□ 0.3
ShbQ6PD21 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
ShbQ6PD21 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShbQ6PD21 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC16.95■□□□□ 0.3
ShbQ6PD21 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.95■□□□□ 0.3
ShbQ6PD21 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShbQ6PD21 Gm14928-201ENSMUST00000120198 477 ntBASIC16.95■□□□□ 0.3
ShbQ6PD21 Gm11543-201ENSMUST00000120758 370 ntBASIC16.95■□□□□ 0.3
ShbQ6PD21 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.95■□□□□ 0.3
ShbQ6PD21 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC16.95■□□□□ 0.3
ShbQ6PD21 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShbQ6PD21 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
ShbQ6PD21 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShbQ6PD21 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
ShbQ6PD21 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms